Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944338.1_cds_XP_016487203.1_77964
CDS Infomation

[gene=LOC107807360] [db_xref=GeneID:107807360] [protein=U3 small nucleolar RNA-associated protein 6 homolog isoform X2] [protein_id=XP_016487203.1] [location=join(15362..15757,17126..17481,17537..17837,19498..19953,20920..21089,21669..21852,22231..22317)] [gbkey=CDS]
Sequence

ATGGCGGATGTGGTACAGTACAAGATGGAGCGAATGCTCCCTGAGCTAGACGACCTAGAA
CGGCGCGGCTTATTCAGCCGCCATGAAATAGCGGAAATAGTTAAACAACGACGTAAATTC
GAGTACAGGCTAAAGAGACCTAGTCCGTTAAAGCAGGATTTTGTTGCTTATATTGATTAT
GAGAAAAGTCTAGATGCTCTTCGACTTCTACGTAAGAAAGCTCAGATGAAGAAAATGGGC
GATAGGAAGGTGAAGAAATCGGTTTCGGATTATGCTGGAGTTTCTAGGATTATTGAGATT
TATCGGCTTGCGACGAGTAGGTTTAAGGGCGACATAGAGCTTTGGTTTCAGTATTTGGAG
TTTTGTAGGGAGCGAAGGAATGGTCGAATGAAGAAGGCCCTGGCGCAGGCAATTAGGTTT
CACCCTAAGGTGCCTGGAGTTTGGATATATGCTGCAGCTTGGGAATTTGACAACAACTTA
AATGCTGCTGCTGCTCGTGCCCTGATGCATAGTGGCTTGAGAGCATGTCCAACTTCTGAG
GATCTGTGGGTAGAATATCTACGGATGGAGCTTACATACCTAAATAAATTAAAGGCTCGC
AAAGTCGTGTTAGGAGAAGATGAGGGAACATTGGCTCGTTCTGGCAAAAATGCTAAAGAG
GAACAGTGGAGAGATGAGAACAAGGAATTATTTATGGCCCTTGATGATAAAAGAGAGGAT
GACAAATTATCCAACCTTCACGAAGGAGACCCAAAGGAAAAATTAGATTTATTTAGGGAA
CAAGGTTTAAGTTTTCTTCGGACAGTTTACAGTGGTTCTATTAAAGCCCTCCCTTCCAGT
TTCAGTTTAAGAACACGGTTTCTTGAGATACTAGCAGCAACAGATTTAGCTCATTCAGAA
GATATGCGAAATGAGATACTTGCTGATATGAAACGGGACTTTTCCGAAGAACCAAAATAT
TGGGATTGGCTTGCAAGACAGGAAGTGATTGATCTTAATAATCCAGAGAGTACTGAAGCA
ATGACAGCTGATCAGTTAAGCACAGCAATTCAGGTTTATGAGGAGGGTTTAAAATTTGTG
CCTTCAGCCTCAATGTTTGATTGTTATTCAAAGTTCTTGATGGATGTCATTCATTTTAGA
AATCAGAGCAGTCAATCTTCTGAGCACTTCGGTGCATCTAGTCATGCTATGGATCCTATT
TCACATCTCCTGGTAGTATTTGAAAAGGCTGAAACCATGGGGTGCATCACAGAGGATCTT
GCTTGTCAGCATGTTTCTTTTCTATTGCAACTTGGGAAAGTAGATGAAGCTAAGACTTTG
GCGGAGAAATTGTGTTCTGGAAAATTTTCAGAAGCAGTGCAGCTATGGGCTTTACGGCTC
TCAGTGGAAATGAGACTTATCCAGAAGAGCTGCACTCCAAATAAGGCAGCTCTGTCTTCT
GTCTTTGAACTCATGAGAAATGTTTTATTGAAAGTTCCTGTATCAGAGGCAGAAACTATA
TGGCTTATGGCGATCAAATATTTTTCCACTCAAAAACAGTTTGACAAGTTAGTCGAGACT
TCTATGATTTCACTGGCCAAAGATGGTGGAAGTGATGATGGATTTTCCCTCTCTTCTGCC
ATCGTCAATTTTGTTCTGCAAAGGGATGGACTTGGGAGTGCTAGAGAGTTATATAAGAGA
TTTCTTGCTTTACCGCATCCAGGACTTTCTTTTTATAGAAATTGCATTGAGCTGGAATTG
AACCTTGCATCTAGTGGAGATAAGATTAGTCTCGGAAATGCCCGGAAATTGTATGAGACT
GCGCTTACAACTTATGATCAAGATACTGGATTGTGGCGAGACTATTATTATATGGAAGTT
AAGATGGGAACATCAGAAACTGCAGCAGCCGTTCACTGGCGAGCACGGAAAACACTCAAG
ACGAATATTTCCCTTCTACCCTCACAGTGA

Peptide Sequence

PEP ID

XP_016487203.1
PEP Infomation

PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog isoform X2 [Nicotiana tabacum]
Sequence

MADVVQYKMERMLPELDDLERRGLFSRHEIAEIVKQRRKFEYRLKRPSPLKQDFVAYIDY
EKSLDALRLLRKKAQMKKMGDRKVKKSVSDYAGVSRIIEIYRLATSRFKGDIELWFQYLE
FCRERRNGRMKKALAQAIRFHPKVPGVWIYAAAWEFDNNLNAAAARALMHSGLRACPTSE
DLWVEYLRMELTYLNKLKARKVVLGEDEGTLARSGKNAKEEQWRDENKELFMALDDKRED
DKLSNLHEGDPKEKLDLFREQGLSFLRTVYSGSIKALPSSFSLRTRFLEILAATDLAHSE
DMRNEILADMKRDFSEEPKYWDWLARQEVIDLNNPESTEAMTADQLSTAIQVYEEGLKFV
PSASMFDCYSKFLMDVIHFRNQSSQSSEHFGASSHAMDPISHLLVVFEKAETMGCITEDL
ACQHVSFLLQLGKVDEAKTLAEKLCSGKFSEAVQLWALRLSVEMRLIQKSCTPNKAALSS
VFELMRNVLLKVPVSEAETIWLMAIKYFSTQKQFDKLVETSMISLAKDGGSDDGFSLSSA
IVNFVLQRDGLGSARELYKRFLALPHPGLSFYRNCIELELNLASSGDKISLGNARKLYET
ALTTYDQDTGLWRDYYYMEVKMGTSETAAAVHWRARKTLKTNISLLPSQ

Transcript Sequence

Gene sequence data has not been registered.